Note: When clicking on a Digital Object Identifier (DOI) number, you will be taken to an external site maintained by the publisher.
Some full text articles may not yet be available without a charge during the embargo (administrative interval).
What is a DOI Number?
Some links on this page may take you to non-federal websites. Their policies may differ from this site.
-
Free, publicly-accessible full text available May 21, 2026
-
Natural and synthetic multicomponent gels display emergent properties, which implies that they are more than just the sum of their components. This warrants the investigation of the role played by interspecies interactions in shaping gel architecture and rheology. Here, using computer simulations, we investigate the effect of changing the strength of the interactions between two species forming a fibrous double network. Simply changing the strength of interspecies lateral association, we generate two types of gels: one in which the two components demix and another one in which the two species wrap around each other. We show that demixed gels have structure and rheology that are largely unaffected by the strength of attraction between the components. In contrast, architecture and material properties of intertwined gels strongly depend on interspecies “stickiness” and volume exclusion. These results can be used as the basis of a design principle for double networks which are made to emphasize either stability to perturbations or responsiveness to stimuli. Similar ideas could be used to interpret naturally occurring multicomponent gels.more » « lessFree, publicly-accessible full text available May 13, 2026
-
Molecular motors, kinesin and myosin, are dimeric consisting of two linked identical monomeric globular proteins. Fueled by the free energy generated by ATP hydrolysis, they walk on polar tracks (microtubule or filamentous actin) processively, which means that only one head detaches and executes a mechanical step while the other stays bound to the track. One motor head must regulate the chemical state of the other, referred to as “gating”, a concept that is still not fully understood. Inspired by experiments, showing that only a fraction of the energy from ATP hydrolysis is used to advance the kinesin motors against load, we demonstrate that the rest of the energy is associated with chemical transitions in the two heads. The coordinated chemical transitions involve communication between the two heads - a feature that characterizes gating. We develop a general framework, based on information theory and stochastic thermodynamics, and establish that gating could be quantified in terms of information flow between the motor heads. Applications to kinesin-1 and Myosin V show that information flow, with positive cooperativity, at external resistive loads less than a critical value, F c . When force exceeds F c , effective information flow ceases. Interestingly, F c , which is independent of the input energy generated through ATP hydrolysis, coincides with the force at which the probability of backward steps starts to increase. Our findings suggest that transport efficiency is optimal only at forces less than F c , which implies that these motors must operate at low loads under in vivo conditions.more » « less
-
Conventional kinesin, responsible for directional transport of cellular vesicles, takes multiple nearly uniform 8.2-nm steps by consuming one ATP molecule per step as it walks toward the plus end of the microtubule (MT). Despite decades of intensive experimental and theoretical studies, there are gaps in the elucidation of key steps in the catalytic cycle of kinesin. How the motor waits for ATP to bind to the leading head is controversial. Two experiments using a similar protocol have arrived at different conclusions. One asserts that kinesin waits for ATP in a state with both the heads bound to the MT, whereas the other shows that ATP binds to the leading head after the trailing head detaches. To discriminate between the 2 scenarios, we developed a minimal model, which analytically predicts the outcomes of a number of experimental observable quantities (the distribution of run length, the distribution of velocity [ P ( v ) ], and the randomness parameter) as a function of an external resistive force (F) and ATP concentration ([T]). The differences in the predicted bimodality in P ( v ) as a function of F between the 2 models may be amenable to experimental testing. Most importantly, we predict that the F and [T] dependence of the randomness parameters differ qualitatively depending on the waiting states. The randomness parameters as a function of F and [T] can be quantitatively measured from stepping trajectories with very little prejudice in data analysis. Therefore, an accurate measurement of the randomness parameter and the velocity distribution as a function of load and nucleotide concentration could resolve the apparent controversy.more » « less
An official website of the United States government
